Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Amino acid permease family protein from Pseudomonas putida KT2440

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 35/350 (10%)

Query: 1   MNQLKKDISLGAGIAQLSTTLMGTGLFMVPAIAAGIAGVFS-------LWAWLLLFVAIC 53
           M+Q     SL   +   S  L G   F+ P I  G  GV +         A+L+    + 
Sbjct: 1   MSQSTSGASLRRSLGPFSVLLFGLA-FLAPLIVFGTYGVITQASGNTTAMAYLVAATGVV 59

Query: 54  PIALTFAQLGKRYPNAGGTAYFVRQAFNPRLERAVAWLFLSVIPVGVPAAV-TLAASFLQ 112
             AL++ +L + +P AG    + R+  N  L   V W  L +    +P  +  L AS+L 
Sbjct: 60  FTALSYGRLVRVFPVAGSAYTYTRKMLNANLGFMVGWAAL-LDYFFIPMLIWLLGASYLN 118

Query: 113 ALLPAPLANPLLTQTLTILLLVGVNLAGTKSSGRLQTL------------IALAIFSLVI 160
              P       +T  +    L+  N+ G + + R   L            I L +  +V 
Sbjct: 119 MAFPEVPQWVWITGFIVSTSLL--NVLGIQVANRFNVLLMVVQLVIIAVFIGLCVHYIVA 176

Query: 161 AFWWRGEVTTQDLVMPALTQE-GWVSIGAALAVMFWCFVGIEAFAHMGEEFRNPQRDFPL 219
           A    G ++ +    P   Q+  + +  A  A+  + F+G +A + + EE R+P R  P 
Sbjct: 177 ANGPGGLLSAK----PFFNQDVPFATSMAGAAIAAYSFLGFDALSTLSEETRDPGRTLPR 232

Query: 220 AILIGSFVAGLTYWACSVVVLKFSAFGTPQFD--SGAIPWLSDQLFGTRWAIMISVIGFL 277
           AIL+ + + G  Y   S  +  + A  +P F+   GA   ++  + G  +  ++     +
Sbjct: 233 AILLVALIGGSVYVGSSYFM--YLAHPSPTFELVDGAAFEIARMIGGDLFFAVVLTGIIV 290

Query: 278 ACFASLNLYTQSLARMVWAQAREYR-PESAIARVSIR-GVPAHATLLVGV 325
           A FA+   +  S+ R+++A  R+ + P      +  R   PA   LL GV
Sbjct: 291 AHFAAGMSFQASVGRLLYALGRDNQLPRRLFGALHPRYKTPAFNILLCGV 340