Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Putrescine importer PuuP from Pseudomonas sp. DMC3

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 93/358 (25%), Positives = 164/358 (45%), Gaps = 56/358 (15%)

Query: 1   MNQLKKDISLGAGIAQLSTTLMGTGLFMVPAIAAGIAGVFSLW-------AWLLLFVAIC 53
           M +L++ +SLG      S  L G   +M P I  G  G+ +         A+L   VA+ 
Sbjct: 1   MARLQRTLSLG------SVVLFGIA-YMTPIIVLGTFGILAQSTAGMVPAAYLAALVAMF 53

Query: 54  PIALTFAQLGKRYPNAGGTAYFVRQAFNPRLERAVAWLFLSVIPVGVPAAVTL-AASFLQ 112
             A+++ ++   +P AG    +VR+A +P+L     W  L +  + +P A+ L  A++L 
Sbjct: 54  FTAMSYGRMAAAFPVAGSAYSYVRKAISPKLGFIAGWAVL-LDYLFLPMAIWLIGAAYLA 112

Query: 113 ALLPAPLANPLLTQTLTILLLVGV----NLAGTKSSGRLQTLIALAIFSLVIAF------ 162
           +  P+      + Q + +L  +G+    N+ G K +  +  L+ L  F ++IAF      
Sbjct: 113 SAFPS------IPQWIWVLAFIGITSAINIVGLKLANGINALLMLVQFLVLIAFVALCVH 166

Query: 163 WWRGEVTTQ----------DLVMPALTQEGWVSIGAALAVMFWCFVGIEAFAHMGEEFRN 212
           +  G+ +T           D+ MP +        GAA+A   + F+G +A + + EE R+
Sbjct: 167 YIGGDASTPLWSIKPFFNGDMQMPLIMS------GAAIAC--YSFLGFDAVSTLTEETRD 218

Query: 213 PQRDFPLAILIGSFVAGLTYWACSVVV-LKFSAFGTPQFDSGAIPWLSDQLFGTRWAIMI 271
           P+R  P AI++ + + GL +   S  V +   +F     DS A     +   G    + I
Sbjct: 219 PRRTIPRAIMLITLIGGLIFVGVSYFVQIAHPSFQFDSVDSAAYEIARN--IGGDLFVSI 276

Query: 272 SVIGFL-ACFASLNLYTQSLARMVWAQARE-YRPESAIARVSIR-GVPAHATLLVGVV 326
            +IG +   FAS      S +R+++A  R+   P+S    +  R G P ++ LL   V
Sbjct: 277 FLIGLIVGQFASGLSAQASGSRLLFAMGRDGVLPKSFFGTLHARFGTPVNSILLCAAV 334