Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., putative amino acid/amine transport protein (VIMSS) from Escherichia coli BW25113

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 93/424 (21%), Positives = 173/424 (40%), Gaps = 33/424 (7%)

Query: 3   QLKKDISLGAGIAQLSTTLMGTGLFMVPAIAAGIAGVFSLWAWLLLFVAICPIALTFAQL 62
           +L+K + L   +      L    +F    I +GI+      ++LL    +   A+++ +L
Sbjct: 17  RLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKL 76

Query: 63  GKRYPNAGGTAYFVRQAFNPRLERAVAW------LFLSVIPVGVPAAVTLAASFLQALLP 116
            +++P AG    + +++ NP +   V W      LFL +I       V LA  +L AL P
Sbjct: 77  VRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMI------NVLLAKIYLSALFP 130

Query: 117 APLANPLLTQTLTILLLVGVNLAGTKSSGRLQTLIALAIFSLVIAFWW-------RGE-V 168
                P +     + +L   NL          TL  L   S+++ F +       +GE V
Sbjct: 131 E--VPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQGLHKGEGV 188

Query: 169 TTQDLVMPALTQEG-WVSIGAALAVMFWCFVGIEAFAHMGEEFRNPQRDFPLAILIGSFV 227
            T   + P +++    + I     ++ + F+G +A   + EE  +  R  P AI + +  
Sbjct: 189 GTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVY 248

Query: 228 AGLTYWACSVVVLKF----SAFGTPQFDSGAIPWLSDQLFGTRWAIMISVIGFLACFASL 283
            G+ + A S  +  F    S F  P     A+P ++  + G  +  +     F+   AS 
Sbjct: 249 GGVIFIAASFFMQLFFPDISRFKDP---DAALPEIALYVGGKLFQSIFLCTTFVNTLASG 305

Query: 284 NLYTQSLARMVWAQARE-YRPESAIARVSIR-GVPAHATLLVGVVLFASCFIGHLTGLDL 341
                S++R+++   R+   PE     V  +   PA   ++VG+V  ++ F   +T   L
Sbjct: 306 LASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLVTATAL 365

Query: 342 EFFLKLANGIFVLVYLLAMLAAFK-LLTGWSKHLAGLALVLCAGVFLCLGWSMLYALGVF 400
             F  L    FV + +       K +   W  H   L + L   + + + W  L +  + 
Sbjct: 366 INFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHYLLMPLVGALTVGVLWVNLESTSLT 425

Query: 401 VLLI 404
           + L+
Sbjct: 426 LGLV 429