Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., neutral amino-acid efflux system (NCBI) from Escherichia coli BW25113

 Score = 73.2 bits (178), Expect = 3e-18
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%)

Query: 3   LTVWLSLFTICILGAMSPGPSLAMVAKHSLAGGRKNGFAAAWAHAFGIGVYAFITLIGLA 62
           LTV L + T       +PG +L +V + SLA GR+ G       A G   Y+ + L GLA
Sbjct: 22  LTVGLFVITF-----FNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLA 76

Query: 63  VVLHQSPVLFKTISYAGAAYLAYLGWNALRSKG-GVAAKLESGESVSVWQSAREGLLISL 121
            ++ Q   +F  I   G AYL +  W ++R +     + L+   S   +   R GL+  L
Sbjct: 77  TLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDL 136

Query: 122 LSPKIALFFIALFS----QYVAVGSDLTSKAAIVITPLVVDGLWYSFITLILSSPRLLDK 177
            +P+  LFFI++FS          + L + A IV+  ++    W  F++   S P +   
Sbjct: 137 SNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASII----WRVFLSQAFSLPAVRRA 192

Query: 178 LRARAVLIDRLSGLVLIALAIRVLW 202
                 +  R+ G ++   A+R+++
Sbjct: 193 YGRMQRVASRVIGAIIGVFALRLIY 217