Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., predicted inner membrane protein (RefSeq) from Escherichia coli BW25113

 Score =  140 bits (352), Expect = 1e-37
 Identities = 97/437 (22%), Positives = 208/437 (47%), Gaps = 25/437 (5%)

Query: 7   ISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQIG 66
           I I++ ++  S +FS SE  +    + RLR MA +G+  A+RV +L  +P    ++V IG
Sbjct: 10  IIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIG 69

Query: 67  LNAVAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIADLMPKRI 126
            N V I+   +G              ++   L   A   ++  ++T + ++ A+++PK I
Sbjct: 70  NNLVNILASALGT-------------IVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTI 116

Query: 127 AMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTE--RNDEITSDDIYA 184
           A   PE++A      +     L+ P VW  N +  +L R + + T+   +  ++ +++  
Sbjct: 117 AALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRT 176

Query: 185 VMDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKISQHP 244
           ++        + +  Q M+ SV +++ + V   M  R  ++ ++++D  + I +++S  P
Sbjct: 177 IVHESRSQ--ISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSP 234

Query: 245 HNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPI--IPDTLSLSEALE 302
           H + ++    LD     +  +    R+++ +    KE+ +     I  +P+   LS  L 
Sbjct: 235 HGRIVLYRDSLDDAISMLRVREAW-RLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLV 293

Query: 303 YFKINRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAEG---EEQIVARDGNSWLVDG 359
            F+ N+    +V+NEY  + G+VT  D+   ++G +  +      E++  ++  S ++DG
Sbjct: 294 KFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDG 353

Query: 360 VTPITDVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDIDNYKV 419
              + ++ ++F       + +  T+ G ++  L +IP     V    Y  +++D+ +  +
Sbjct: 354 TANVREINKAF--NWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMI 411

Query: 420 DQLLVSRVEPLEPIVKE 436
            Q+ V  V+PL   V E
Sbjct: 412 KQVKVFPVKPLRESVAE 428