Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  496 bits (1278), Expect = e-145
 Identities = 250/423 (59%), Positives = 320/423 (75%)

Query: 6   NISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQI 65
           +I +I+ LIA S FFSMSEISLAA+RKI+L+ +ADEG+  A+RVL +Q  PG FFTVVQI
Sbjct: 4   SILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQI 63

Query: 66  GLNAVAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIADLMPKR 125
           GLNAVAI+GGIVG++AF+P   +L    + A L  Q SF+LSF LVT MFIL ADL PKR
Sbjct: 64  GLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKR 123

Query: 126 IAMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTERNDEITSDDIYAV 185
           I M  PE +A  ++  M  C+ +  P VWFFNGLAN++FR   +P  R D+ITSDDIYAV
Sbjct: 124 IGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAV 183

Query: 186 MDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKISQHPH 245
           ++AGA AGVL K E +++E+VFE++S  V S+MT RE++++ +L + E+ +K K+++HPH
Sbjct: 184 VEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPH 243

Query: 246 NKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEALEYFK 305
           +KFLVC+  +D I GYVDSK LL RV+  Q + L     +    I+PDTL+LSEALE FK
Sbjct: 244 SKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFK 303

Query: 306 INRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAEGEEQIVARDGNSWLVDGVTPITD 365
               DFAV+MNEYALVVG++T ND+ + +MG  V    EEQIVARD NSWL+DG TPI D
Sbjct: 304 TAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDD 363

Query: 366 VMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDIDNYKVDQLLVS 425
           VMR   I+EFPQ  NYETI GFMM+MLRKIP+RTDSV +AGYKFEVVDIDNY++DQLLV+
Sbjct: 364 VMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVT 423

Query: 426 RVE 428
           R++
Sbjct: 424 RID 426