Pairwise Alignments

Query, 328 a.a., drug/metabolite DMT transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., predicted methyl viologen efflux pump (RefSeq) from Escherichia coli BW25113

 Score =  270 bits (691), Expect = 2e-77
 Identities = 129/287 (44%), Positives = 184/287 (64%)

Query: 22  KHTLYGVAAILLWGSLMALTRRVAEEFSPIGGAALIYTVSTLFLLFAMGMPRLKAGSSRY 81
           K TL G+ AI+LW +++ L R V+E   P+GGAA IY++S L L+F +G PR++     Y
Sbjct: 5   KATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQIPKGY 64

Query: 82  ILIGGALFVSYEICLALALGMASDRLQAIEMSVINYLWPALTVLIAVLLSQRAVSFWVYP 141
           +L G  LFVSYEICLAL+LG A+   QAIE+ ++NYLWP+LT+L A+L + +  ++ + P
Sbjct: 65  LLAGSLLFVSYEICLALSLGYAATHHQAIEVGMVNYLWPSLTILFAILFNGQKTNWLIVP 124

Query: 142 SVGLAFAGVAWTIVAEQGISLADFSARIATNPAVYAMALTGAFIWAIYCNVTQRLARGQN 201
            + LA  GV W +  + G+   +    I T+P  Y +A  GAFIWA YC VT + ARG N
Sbjct: 125 GLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARGFN 184

Query: 202 AIVLFFAATAATLWLQYALSNEPALSFTGSSMGTLLLTGIVMGSGYALWNVAILRGNMLL 261
            I +F   T A+LW+ Y L+ +P + F+   M  L+     +G  YA WNV IL GN+ +
Sbjct: 185 GITVFVLLTGASLWVYYFLTPQPEMIFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTI 244

Query: 262 LATLSYFTPVISTLFSSLILGVVLGLSFWQGVIMVTFGSLICWWVTR 308
           +A  SYFTPV+S+  ++++L   L  SFWQG +MV  GSL+CW  TR
Sbjct: 245 MAVGSYFTPVLSSALAAVLLSAPLSFSFWQGALMVCGGSLLCWLATR 291