Pairwise Alignments

Query, 328 a.a., drug/metabolite DMT transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 88/302 (29%), Positives = 132/302 (43%), Gaps = 26/302 (8%)

Query: 9   TLRFTVKQQFITHKHTLYGVAAILLWGSLMALTRRVAEEFSPIGGAALIYTVSTLFLLFA 68
           T   T+  +  +++ TL G  AILLW +L  L    A     +    L+ T   L  L  
Sbjct: 2   TTTATLPDRRSSNRATLVGFIAILLWATLAPLATLAAM----VPPFQLVATSFLLAFLVG 57

Query: 69  MGMPRLKAGSS----RYILIGGALFVSYEICLALALGMASDRLQAIEMSVINYLWPALTV 124
            G    +  +     R  +   AL V           MA      +E ++INYLWP L V
Sbjct: 58  SGWTASRGDNPLRYFRQPVAAWALGVGGLFGFHFLYFMALQAAPPVEANLINYLWPLLIV 117

Query: 125 LIAVLLSQRAVSFWVYPSVGLAFAGVAWT--IVAEQGI--SLADFSARIATNPAVYAMAL 180
           L + LL    +  W    VG A AG+A T  ++A  G   S+  FS   A  P  YA AL
Sbjct: 118 LFSALLPGERLRAW---HVGGAVAGLAGTALLIARGGTSGSVGGFSIDPAHLPG-YAAAL 173

Query: 181 TGAFIWAIYCNVTQRLAR----GQNAIVLFFAATAATLWLQYALSNEPALSFTGSSMGTL 236
             A  WA Y  + +RL +      +A+  F   TA    L +          + +  G +
Sbjct: 174 GSAVTWAGYSVLRRRLGQIGEAPTDAVSAFCLVTALLSLLCHLALERTVWPDSAAGWGAM 233

Query: 237 LLTGI-VMGSGYALWNVAILRGNMLLLATLSYFTPVISTLFSSLILGVVLGLSFWQGVIM 295
           LL G+  +G+ + +W+  +  G++  L  LSY  P++STL     L V+ GL+   G+I 
Sbjct: 234 LLLGLGPVGAAFFVWDYGVRHGDIRALGALSYLAPLLSTL-----LLVLFGLAANSGIIW 288

Query: 296 VT 297
           V+
Sbjct: 289 VS 290