Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Transcriptional regulator Swit_0960, LysR family from Sphingobium sp. HT1-2

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 25/291 (8%)

Query: 6   IEAFCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEAGKAVY 65
           +E    IA  G+ + AA +L+  +  +S  ++ LE  L  ALF R G  + L+ AG+ + 
Sbjct: 11  LETLLWIARLGTFAAAAARLNTTQPAISARVRELESHLGTALFRREGRTMALTPAGRELV 70

Query: 66  KDCESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNTSFNMV 125
           ++ E L      +   C+   S     + I   +           +QL +  P+ S  + 
Sbjct: 71  RESEPLWARFQGVLMGCSD-ISGATGIIRIGAGEIAAASCLPGFVAQLGRDLPHVSLEVD 129

Query: 126 LASSGDLANLVATQQVNCAFGVDYERLDDPRITYQPLGKIRLM---------SVCNSQHP 176
           +A + DL   +A+   + AF     R+  P +   P+G + L+         ++ + + P
Sbjct: 130 IALTADLIQQLASGHADLAFAAG--RIAHPMLRTAPIGSVDLLWLASPATVATMADIRPP 187

Query: 177 LVKQKRVSDEELRKFMQAVMVYLNEKDNP-NLQPFSRRYIGFSSFEYMLNTILSENAWGV 235
           +     +S   L + M+  +   +  D P NL          ++   M++ +L     G+
Sbjct: 188 IWSLTNLS--PLYRIMKDAIAASDLADCPLNL---------CNNVRTMIDIVLEGGGIGI 236

Query: 236 LPEPLIRHYLREQQLTVIKHTYGLTQEDFCLFQPIGMHDNPAILWLSDKVS 286
            P P+ R  L E +L  +     +   DF +       D P +L + D+ S
Sbjct: 237 FPRPMARQQLAEGRLVPVPGAPLMPPVDFHVAVRAAEAD-PLVLTIFDRAS 286