Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Cyn operon transcriptional activator from Alteromonas macleodii MIT1002

 Score = 67.0 bits (162), Expect = 5e-16
 Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 25/256 (9%)

Query: 3   LSQIEAFCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEAGK 62
           L  ++ F  + ++GS+S AAR+L    + +S  ++ LE ++ ++LF R    L+L+EAG+
Sbjct: 6   LRSLQVFVAVTDSGSMSVAARELHMTVSAISQQLRKLEHDIGLSLFNRNTRSLSLTEAGR 65

Query: 63  AVYKDCESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNTSF 122
             Y+  + +L TA   +Q       +   ++ I   +        +   +L + FP  + 
Sbjct: 66  IYYETSKQMLQTAELAQQKIESLQDDPTGKINIIAPEGFGGGLLSEPLKKLCEEFPKITI 125

Query: 123 NM--------VLASSGDLANLVATQQVNCAFGVDYERLDDPRITYQPLGKIRLMSVCNSQ 174
           ++        ++ASS DL        V C     +  + D   +   L   + +   ++ 
Sbjct: 126 SLTVTDEPKDIIASSADL--------VLC-----FAPVSDTNFSSLVLATWKRILCVSAD 172

Query: 175 HPLVKQKRVSDEELRKFM----QAVMVYLNEKDNPNLQPFSRRYIGFSSFEYMLNTILSE 230
           HPL  +   S E L        + +  Y+ + ++        + I  +S + ++      
Sbjct: 173 HPLANETLTSPEALNAHTYIAHRHIEEYVMKHESEGEYELDTQRIDVNSMQTLIKLTQDS 232

Query: 231 NAWGVLPEPLIRHYLR 246
             + VLPEP +RH L+
Sbjct: 233 VGYAVLPEPEVRHLLK 248