Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  102 bits (253), Expect = 2e-26
 Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 7/287 (2%)

Query: 30  LKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIPTPYVQ 89
           L  L  L V+L   SV   A RL +SPS++S+ LA+LRE   D L  R G  L+ TP   
Sbjct: 4   LNLLITLDVLLAEGSVAAAAKRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVATPRAL 63

Query: 90  QMGPTVHHVLSSMNGLLHCTE-FDPQAYQGHYRLAMRESTFELFAPKVTAILAACSSELS 148
           ++   V  ++   N +L   +  +       + L   E   E F P + A  A  +  + 
Sbjct: 64  ELRDQVSRLVQEANAVLRPVQSLNMNQVTRTFTLRTSEEFVENFGPALLARAARDAPGVR 123

Query: 149 MTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMSADHPLAH 208
           +    K       L+ G +D      D    PT   +++ Q +  D LV ++ + HPL+ 
Sbjct: 124 LRFIHKADKDSTLLREGSVDLETGVVD----PTAGPEVLTQALFRDRLVGVVRSGHPLSR 179

Query: 209 AELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILCRQTHLLL 268
            ++SV+ Y A +H+ +     +    +  L  Q  TR+I      F  A  L R T L+ 
Sbjct: 180 GDVSVERYAAGQHVYVSRRGQDRGQIDDLLEAQGLTRQITTIVAGFATAIALARDTDLIA 239

Query: 269 TCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
           +  +R+  H  Q +GL +  LP        +++W+     D A RWL
Sbjct: 240 SVPERYTAH--QPEGLHRFALPLTLPTFTVAMLWHPRLDADLAHRWL 284