Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 6e-32
 Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 17/306 (5%)

Query: 25  LSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIP 84
           L R  L  L  L  +L+ + VT+ A RL +S  ++S  LA+LR+LL D L  R G  L+P
Sbjct: 10  LRRIDLNLLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLLVRQGGSLVP 69

Query: 85  TPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAACS 144
           T    ++ P +   L  +  LL    FDP + +  +R+AM + +  +F P +   L   +
Sbjct: 70  TARALELAPPLTEALGQVQALLAPNRFDPASAKRRFRVAMSDYSAAIFLPDLVRTLRREA 129

Query: 145 SELSMTIHSKEHYGFEALQSGLIDCIL---LPHDISQPPTFAQDLVWQVIESDELVCLMS 201
             + + I        +A + G++D +L   L       P    +L    +  +   CL+ 
Sbjct: 130 PGIDLQI-------IQASREGMVDGVLNGDLDLAAGVFPDMPAELRTTPLFEEHYTCLVD 182

Query: 202 ADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILC 261
            D   A   L +  YL+  H+ +       P  E+ LT   E R +A++ P +G A  L 
Sbjct: 183 RDSLPASGTLDLPTYLSRPHVLLEMRGSGTPEIERALTTIRERRHVAISLPHWGVAPQLI 242

Query: 262 RQTHLLLTCSKRW---ADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWLCQQ 318
           + T L+LT S R     DH    Q L+    PF     A+ L W+     D  ++WL  Q
Sbjct: 243 QGTDLILTVSSRGLLNIDH----QHLLAVPAPFHIPSFAFELAWHARRGGDSGLQWLIGQ 298

Query: 319 LNSQLT 324
           +   L+
Sbjct: 299 VQGVLS 304