Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., no description from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 2e-27
 Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 10/295 (3%)

Query: 28  FSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIPTPY 87
           F L  L  +  + NTRSVT  AA L +S S  S  LA+LR+L  D LF R  + + PTP 
Sbjct: 12  FDLNLLRVVVTLGNTRSVTHAAAALGMSQSGFSSALARLRQLCGDPLFVRTASGMSPTPR 71

Query: 88  VQQMGPTVHHVLSSM-NGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVT---AILAAC 143
            ++M  T   VL+ +  G+L   EFD    +  +RLAM +    +F P++     + A  
Sbjct: 72  AERMVATARSVLAQVAEGVLGQPEFDAATTRTEFRLAMADVAEIVFLPRLLRHFQVHAPH 131

Query: 144 SSELSMTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMSAD 203
           +  + +T+ +      +A+ SG ID  L       P   AQ    Q +      C++   
Sbjct: 132 ARVVCVTLPNGPLQ--QAMASGEIDLALGYF----PDLNAQSFFRQRLYVHTYACMVRKG 185

Query: 204 HPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILCRQ 263
           HPL  + L+  AYL + H  +     +  +F+K+LT++   RRI ++T    +   +   
Sbjct: 186 HPLEGSRLTQKAYLNHGHADVASPARSNEFFDKFLTRRGLQRRIVLSTQHHMSLPAIIEA 245

Query: 264 THLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWLCQQ 318
           T LL T          Q   +    LPF+    A    W++   +D   RWL  Q
Sbjct: 246 TDLLATVPLATGARFAQLGAVQLLGLPFQPPTFAVQAHWHRLVHHDARNRWLRSQ 300