Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 31/310 (10%)

Query: 21  DYIHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGN 80
           D     +  L  +  LH +L  RSV++ A RL +   ++S  L +LREL  D L  R G+
Sbjct: 3   DQALFDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGS 62

Query: 81  QLIPTPYVQQMGPTVHHVLSSMNGLL-HCTEFDPQAYQGHYRLAMRESTFELFAPKVTAI 139
            ++PT    +M      +L +   L      FDPQ+    +R+A  +    LF P + A 
Sbjct: 63  GMVPTDAGLRMIEPAASILRAAEMLFSDARGFDPQSAATTFRIAASDYMDPLFLPMLVAQ 122

Query: 140 L----AACSSELSMTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDE 195
           +      C  E+       +++G  AL  G +D ++   +  +PP   +DL    +  DE
Sbjct: 123 VKRDAPLCQIEIHALSPDSDYHGHLAL--GQVDLVI--GNWLKPP---EDLHMARLFGDE 175

Query: 196 LVCLMSADHPLAHAELSVDAYLAYKHI----------GILDNELNEPYFEKYLTQQHETR 245
           +V L++ DHP       ++ +LA +HI          GI+D  L+E      L +Q   R
Sbjct: 176 VVSLVNKDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDE------LGRQ---R 226

Query: 246 RIAVATPDFGAAAILCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKP 305
            I      FG    +   + L+LT  +++ +       L     P    ++ Y  +W++ 
Sbjct: 227 NITARCAHFGLIPDMVASSLLVLTTGRQYCERFAARLPLAILECPVALPRLMYYQLWHER 286

Query: 306 SMNDRAIRWL 315
           + +  + RWL
Sbjct: 287 THSSSSARWL 296