Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 6/300 (2%)

Query: 23  IHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQL 82
           I+L    L  LT L  +L  + ++Q A  L +S  ++S+ L +LRE   D L  +  N+ 
Sbjct: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65

Query: 83  IPTPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAA 142
             T   +++   +   L+++  +L   +FDP  Y G + +   +    +  PK+ A    
Sbjct: 66  RLTAKGERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQ 125

Query: 143 CSSELSMTIHSKEHY-GFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMS 201
            +  L + I     Y         + D +L   D S    F Q L      +D    +M 
Sbjct: 126 RAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLF-----NDNYAVVMC 180

Query: 202 ADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILC 261
            +HPLA+  +++++Y   +H+ I  N L +   +  L + +  R +  + P F     L 
Sbjct: 181 RNHPLANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELL 240

Query: 262 RQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWLCQQLNS 321
             T L+ T  +R   H  Q   +    LPF          W+    +    +W+ Q++ +
Sbjct: 241 INTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKN 300