Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (356), Expect = 2e-38
 Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 11/310 (3%)

Query: 14  SLHRLFMDYIHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDD 73
           S+    M    L+R  L  L  L V++   SVT+ AARLC+S S++SK LA+LRE  +D 
Sbjct: 9   SILEKLMQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDP 68

Query: 74  LFYRDGNQLIPTPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFA 133
           LF R    L  TP    + P +  +++ +  L     F PQ+ +  +++A  ES + L  
Sbjct: 69  LFVRTSYGLNATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIM 128

Query: 134 PKVTAILAACSSELSMTIHSKEHYGFEALQSGLIDCILLPHDIS--------QPPTFAQD 185
           P     +      LS++ H+     F  LQ G +D  L   DI          PP    D
Sbjct: 129 PYFLPTIFRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPA---D 185

Query: 186 LVWQVIESDELVCLMSADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETR 245
           +  Q I  D   C++   HP+   + ++ +YL  +H+ +  +  +    +  L      R
Sbjct: 186 ICEQEIYRDNQRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYER 245

Query: 246 RIAVATPDFGAAAILCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKP 305
            IA+  PDF +AA LC  T  + T    +     +   LV+  LP E+  +AY+L W++ 
Sbjct: 246 DIAITVPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRE 305

Query: 306 SMNDRAIRWL 315
             ND A+RWL
Sbjct: 306 RENDPALRWL 315