Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 81/297 (27%), Positives = 126/297 (42%), Gaps = 16/297 (5%)

Query: 25  LSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIP 84
           L +  L  L ALH +L+ R VT+ A RL  S  ++S  LAQLR+  +D L  R G  +  
Sbjct: 11  LRKIDLNLLLALHALLSERHVTRAALRLHRSQPAVSHALAQLRKHFDDPLLVRQGGGMAL 70

Query: 85  TPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAACS 144
           T   Q +   +   LS++  LL    F+P   Q  +RL++ +    +  P +   L   +
Sbjct: 71  TARAQSLAQPLQDALSNLESLLATPLFEPAKAQRRFRLSLSDYASRIILPHLLRHLRQVA 130

Query: 145 SELSMTIHSKEHYGFEA-LQSGLIDCIL-----LPHDISQPPTFAQDLVWQVIESDELVC 198
             + + I         A L  G +D  L     LP DI+  P FA          D  + 
Sbjct: 131 PGVDLAISQASRETMLAQLLDGELDLALGLFPELPQDITAQPLFA----------DRFIS 180

Query: 199 LMSADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAA 258
           +       A  +++++ +LA  H+ +          E+ L  +   RRIA+A P + AA 
Sbjct: 181 VADRQVLPASGDMALEDWLARPHVLMAMRPDAFDEIERALAARGLQRRIALALPHWSAAV 240

Query: 259 ILCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
            +   T L+LT + R      Q + L Q T P       Y   W+    +D   RWL
Sbjct: 241 EVLAGTDLILTVASRAVGSLRQHKTLRQFTPPLAIPSFDYQQAWHNRKDSDPGHRWL 297