Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 71/305 (23%), Positives = 136/305 (44%), Gaps = 14/305 (4%)

Query: 20  MDYIHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDG 79
           M + HL    L  L AL ++L  +++T+ A RL ++ S+ S +L +LR    D+L  + G
Sbjct: 1   MRFHHLD---LNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVG 57

Query: 80  NQLIPTPYVQQMGPTVHHVLSSMNGLLHCTE-FDPQAYQGHYRLAMRESTFELFAPKVTA 138
            ++ PTPY  ++   V  VL ++   +     FDP A + H+RL   +    +   +V  
Sbjct: 58  RKMQPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQ 117

Query: 139 ILAACSSELSMTIHSKEHYGFEALQSGLIDCILLP--HDISQPPTFAQDLVWQVIESDEL 196
            +   + +++  +        E L  G +D +++P  + I   P        Q++  ++ 
Sbjct: 118 KIHQEAPQITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPA-------QLLFEEDH 170

Query: 197 VCLMSADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHE-TRRIAVATPDFG 255
           VC++  D+P     L+++ Y+   HI +          E +   Q+   RR+ V T DF 
Sbjct: 171 VCVVWRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFN 230

Query: 256 AAAILCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
               L   T  + T  +R A+       L     P +   +   ++W++    D   RWL
Sbjct: 231 TLPQLLVGTVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWL 290

Query: 316 CQQLN 320
            ++++
Sbjct: 291 RERIS 295