Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 79/289 (27%), Positives = 115/289 (39%), Gaps = 13/289 (4%)

Query: 31  KHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIPTPYVQQ 90
           K L    V+   RSVT+ A +L  S  +IS  LA+LRE LND LF R    + PTP   Q
Sbjct: 11  KLLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQ 70

Query: 91  MGPTVHHVLSSMNGLLHCTEFDPQ----AYQGHYRLAMRESTFELFAPKVTAILAACSSE 146
           +      VL S+  L   T ++PQ      Q  +RL + +++     P +   L + +  
Sbjct: 71  LIGPCREVLESLRRL---TAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPG 127

Query: 147 LSMTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMSADHPL 206
           + +     +     AL+SG  D       I   P     +  QV+   + VCL +  HP 
Sbjct: 128 IRLEAARIDGNTESALESGEADLA-----IGFVPWLGGGMYQQVLFEQDWVCLSNPQHPR 182

Query: 207 AHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILCRQTHL 266
               +S++ Y A  H+ I      +   E  L +    RRI +  P F     +   T L
Sbjct: 183 LGDGMSLERYRAEGHVQI-SFGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDL 241

Query: 267 LLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
           L T  +          GL     PFE         W+     D   RWL
Sbjct: 242 LGTLPRHIGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWL 290