Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 3e-29
 Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 6/288 (2%)

Query: 29  SLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIPTPYV 88
           SL HL  L  +L  ++++  A RL VS S++S+ LA LRE  +D L  R G   + + + 
Sbjct: 9   SLAHLRTLDHLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGYVLSEHA 68

Query: 89  QQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAACSSELS 148
           + +   +  VL  ++ L     FDP   +  + LA  +   E   P + A L   +  +S
Sbjct: 69  EALVEPLRQVLEELHALRQPAIFDPARCERRFCLAASDYVAEHMLPLLVAALEREAPGVS 128

Query: 149 MTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMSADHPL-A 207
           +   + +   +  L SG ID      D S P     +L  +++  D  VCLM  DHPL A
Sbjct: 129 LEYRTWQAGQYALLASGEIDLATTLFDESPP-----NLHGRLLGEDRAVCLMRQDHPLAA 183

Query: 208 HAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILCRQTHLL 267
            A LS   YLAYKH+ I      + + +++L  Q   RR+++  P F A   +   +  +
Sbjct: 184 QAALSQADYLAYKHVRISGGGDKDSFIDRHLRAQGLQRRVSLEVPFFCATVQVIASSQAV 243

Query: 268 LTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
            T  +  A    +   L  + L F      Y +VW++        RWL
Sbjct: 244 ATVPEHIARQLSRLHDLAWRPLGFIDHSQRYWVVWHQRLQASAEHRWL 291