Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 69/299 (23%), Positives = 136/299 (45%), Gaps = 11/299 (3%)

Query: 23  IHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQL 82
           ++LS+  L        +    ++T+    + ++  ++S  L++LRE  ND LF R    +
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60

Query: 83  IPTPYVQQM-GPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILA 141
           +PTP  Q + GP  + +      +     F+PQ     +R++M + T  +  P +   L 
Sbjct: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120

Query: 142 ACSSELSM-TIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLM 200
             +  + + +   K     + L +G +D   +   ++  P      + Q    D  VC +
Sbjct: 121 RLAPAVMIESFLCKRRETTKELAAGRLD-FAIDAPLNTDPQVRHIKLMQ----DRYVCAL 175

Query: 201 SADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAIL 260
              HPLA ++L++D+YL   HI I        Y +  L +    R++A+ +  +  A+ +
Sbjct: 176 RQGHPLADSKLTLDSYLGMTHIHISSRRNGLGYVDLALGKMGVQRKVALRSQHYLMASQV 235

Query: 261 CRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWLCQQL 319
            +QT + +T  +R+A    +   L  + LP E   +   L W++ +  D A RW+ +Q+
Sbjct: 236 LQQTDMAMTVPERFA----RRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQI 290