Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., HTH-type transcriptional regulator YidZ from Escherichia coli ECRC62

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 32/319 (10%)

Query: 25  LSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIP 84
           ++   L  L  L +++  RSVT+ A R+ V+PS++SK LA+LR   +D LF      L P
Sbjct: 5   ITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64

Query: 85  TPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFA--PKVTAILAA 142
           TP +  M   +   +   N LL     D   +Q       R   FEL A  P +  +L A
Sbjct: 65  TPLMVSMEQNLAEWMQMSNLLL-----DKPHHQ-----TPRGLKFELAAESPLMMIMLNA 114

Query: 143 CSSEL-------SMTIHSKEHYGFEALQSGLIDCILL-----PHDISQPPTFAQDLVWQV 190
            S ++       ++ + + ++   +A+  G +D         P       +    + ++V
Sbjct: 115 LSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174

Query: 191 IESDELVCLMSADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVA 250
           + SD     +  DHP  H   S+D +L Y HI I   + +    +  L +    R IA++
Sbjct: 175 LFSDVPCVWLRKDHPALHETWSLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234

Query: 251 TPDFGAAAILCRQ-THLLLTCSKRWADHAMQAQGLVQKTLPFEYG-------KVAYSLVW 302
            P+F  +  +  Q  +LLL  + R+  +  Q   L    LP  +        +V ++L+W
Sbjct: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294

Query: 303 NKPSMNDRAIRWLCQQLNS 321
           +K + ++  I WL + + +
Sbjct: 295 HKRNSHNPKIVWLRETIKN 313