Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., HTH-type transcriptional regulator SyrM 1 from Acinetobacter radioresistens SK82

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 19/308 (6%)

Query: 23  IHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQL 82
           ++L R  L  L  L V+L  ++VT+ A +L V+  ++S IL +LR L ND L  R    +
Sbjct: 1   MNLERVDLNLLIYLDVLLREKNVTRAAEQLGVTQPAMSNILRRLRNLFNDPLLIRSSEGM 60

Query: 83  IPTPYVQQMGPTVHHVLSSMNGLLH-CTEFDPQAYQGHYRLAMRESTFELFAPKVTAILA 141
            PT    ++ P +   L+ ++ +L   TEF P      +R+   +       P++   L 
Sbjct: 61  TPTERALELQPRIRDALADLSMILEPRTEFRPYTSNRVFRIMTSDYAEATLVPRLVKALR 120

Query: 142 ACSSELSMTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMS 201
           + +  + +   +     +  ++ G +D + +      P +F Q LVW+    D   CL++
Sbjct: 121 SEAPNVVLDFLTPSDVSYRDMEQGKVD-LAINRFNEIPQSFHQVLVWR----DSYSCLLN 175

Query: 202 ADHPLAHAELSVDAYLAYKHIGIL------------DNELNEPYFEKYLTQQHETRRIAV 249
             HP A   L++ +YL  +HI +             + +    + ++ L +  + R+I+V
Sbjct: 176 NKHP-AMNNLNLKSYLDAQHIWVSKTGMGVGFGVNPEKQAGLGWIDQALERIGQKRKISV 234

Query: 250 ATPDFGAAAILCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMND 309
            T  +   A+L     L+ T   R A    ++Q L+ K  PF   +    + W     + 
Sbjct: 235 FTRHYQMPALLAANVDLIATLPTRIARLQAKSQNLIIKDPPFYIPEFELKMAWCPLLHHH 294

Query: 310 RAIRWLCQ 317
            A RWL Q
Sbjct: 295 PAHRWLRQ 302