Pairwise Alignments

Query, 654 a.a., arginine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Variovorax sp. SCN45

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 76/331 (22%), Positives = 136/331 (41%), Gaps = 35/331 (10%)

Query: 48  GEVYVSPRKDKAHQTQLSSIVKQLEARDLNLPVLVRFPQILHQRVHNICDAFNQAIEEYD 107
           G+ +V+ R    H   +  +     AR+   P+ V   Q +   +     A+ +  E  D
Sbjct: 13  GQPHVAQRDGALH---VEGVALDALAREHGTPLFVYSKQWMLDALA----AYQRGFEGRD 65

Query: 108 YPNKYLLVYPIKVNQQKEVVDEILASQAELEHKQLGLEAGSKPELLAVLAMAQQASSVIV 167
                L+ Y +K N    V+  + A          G +  S  EL  VLA+      +I 
Sbjct: 66  A----LICYAMKANSSLGVL-RVFAEAG------CGFDIVSGGELSRVLAVGADPKKIIF 114

Query: 168 CNGYKDREYIRLALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRLGLRIRL-ASQG 226
               K R  +R AL     G   F V E  +ELD++ + A + G +  + +RI       
Sbjct: 115 SGVGKTRAEMRQALAA---GIACFNV-ESEAELDVLSEVAAAEGKRAPISIRINPNVDPK 170

Query: 227 AGKWQSSGGEKSKFGLAASQVLTVINRLKAENQLEALQLVHFHLGSQMANIRDVRNGVNE 286
              + S+G + +KFG+A  + +           LE +  +  H+GSQ+       +  + 
Sbjct: 171 THPYISTGLKGNKFGIAHDRAVEAYRHAARLPGLEVVG-IDCHIGSQITEASPYLDACDR 229

Query: 287 AVRFYCELRELGAHIDFFDVGGGLAVDYDGTRSQSSNSMNYGLHEYARNIVSTVSDVCNL 346
            +     +   G  I   D GGGL +DY+G     ++++        + +++ +      
Sbjct: 230 VLDLVEAIEAAGVPIHHLDFGGGLGIDYNGEVPPKADAL-------WQQLLAKLD--ARG 280

Query: 347 YGQPRPVIISESGRSITAHHAVLITNVIGTE 377
           +GQ + VI  E GRS+  +  V +T V+ T+
Sbjct: 281 FGQRKLVI--EPGRSLVGNAGVCVTEVLYTK 309