Pairwise Alignments

Query, 654 a.a., arginine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., type III PLP-dependent enzyme from Magnetospirillum magneticum AMB-1

 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 33/259 (12%)

Query: 116 YPIKVNQQKEVVDEILASQAELEHKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDRE 175
           Y +K N   E+V  +    +  +         S+ E+   LA    A  +   N  K + 
Sbjct: 44  YAVKANPAPEIVRMLTEEGSRFD-------VASRGEIDLCLANGAPAERISFGNTIKKQS 96

Query: 176 YIRLALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGG 235
            I  A      G +++   +  +EL+ + + A       R+  RI +   GA +W  S  
Sbjct: 97  DIAYAYAK---GVRLY-AFDSEAELEKLAEAAPG----SRVFCRILMTCDGA-EWPLS-- 145

Query: 236 EKSKFGLAASQVLTVINRLKAENQLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELR 295
              KFG        ++  +KA         V FH+GSQ  ++R     V +A   +  L 
Sbjct: 146 --RKFGCEIDMAKDLL--VKAREMGLDPYGVSFHVGSQQTDLRQWDIAVGKAAMLFSALD 201

Query: 296 ELGAHIDFFDVGGGLAVDYDGTRSQSSNSMNYGLHEYARNIVSTVSDVCNLYGQPRPVII 355
             G  +   ++GGG    Y   R +       GL  YA  ++  ++     +G   P +I
Sbjct: 202 AAGIELRMVNLGGGFPARY---RKEVD-----GLERYAEAVMDAMT---KHFGNNIPSMI 250

Query: 356 SESGRSITAHHAVLITNVI 374
            E GRS+     +L T V+
Sbjct: 251 IEPGRSLVGDAGILETEVV 269