Pairwise Alignments

Query, 516 a.a., cryptochrome/photolyase family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., Uncharacterized protein related to deoxyribodipyrimidine photolyase from Enterobacter asburiae PDN3

 Score =  462 bits (1189), Expect = e-134
 Identities = 240/505 (47%), Positives = 323/505 (63%), Gaps = 13/505 (2%)

Query: 6   VRLILGDQLNHAHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFADYLSA 65
           +RLILGDQLN  HSWF     +V+Y++ EL  E  YV HH QK  A FAAM+AFA  L  
Sbjct: 4   LRLILGDQLNPHHSWFDACNPNVIYVMLELRAETAYVLHHAQKVIAIFAAMRAFASALKE 63

Query: 66  EGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQM-ANLRLSGITI 124
           +GH V ++ L   +    L D +  +     AD   +Q PDE+RL  Q+ A    + +  
Sbjct: 64  KGHRVRYVRLSDGSNRGALEDNLNALVAHYGADRVIWQEPDEWRLDTQLQAWANAASVET 123

Query: 125 GCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFDADNR 184
            CV +EHF     ++   F   K+  ME+FYR MR++ G L+T++G+PEGG+WNFDA+NR
Sbjct: 124 ACVSSEHFFTTREQVSAFFATRKSWRMEYFYREMRRQHGILLTSEGEPEGGKWNFDAENR 183

Query: 185 NKLKS-PDLLQLPTPLCFDNPVASIKARIERHRIPSIG--QVGESLLWPINRAQALSLLA 241
            +    P   +   PL   +  +++ A I+R  + + G  Q G+   WP+NR++A + L 
Sbjct: 184 KRWSGEPPAPEDSRPL---HDYSALWAEIQRCGVNTFGEPQAGK-FRWPLNRSEAKARLD 239

Query: 242 HFCQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQGQ 301
            F    LP+FG +QDAM A+ P    L+HS +SFALN+K+L+PREV+ A    +R+  G 
Sbjct: 240 EFITHVLPHFGAWQDAMHAEEPF---LFHSLISFALNTKMLNPREVVAAAQQVWRS--GH 294

Query: 302 ISLAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQA 361
             L  VEGF+RQILGWREYVRG+YWS MP Y+  N L    PLP +FW G+T+MRCL  A
Sbjct: 295 APLPAVEGFIRQILGWREYVRGIYWSQMPGYRELNALDQHAPLPDWFWTGRTQMRCLAHA 354

Query: 362 ITQSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALFA 421
           + QSL   YAHHIQRLMV GNF+LL+   P  V  WYLG+YIDA EWVELPNT GM+ F 
Sbjct: 355 VGQSLTEAYAHHIQRLMVIGNFSLLSGLSPQAVHEWYLGVYIDAFEWVELPNTLGMSQFG 414

Query: 422 DGGLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLANN 481
           DGGL+A+KPY +S SYI+KMS+YC  C YQ   ++GE ACP N+LYW F  +++ RL NN
Sbjct: 415 DGGLLASKPYVSSASYIHKMSNYCQGCRYQHSQRTGELACPFNALYWDFFARNQARLGNN 474

Query: 482 PRIGMLYKTWDKMTSDSQQAILSTA 506
           PR+G+++K    M  + +QAI   A
Sbjct: 475 PRLGIVFKQLADMKEEERQAIADRA 499