Pairwise Alignments

Query, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., ribonuclease R from Rhodanobacter sp000427505 FW510-R12

 Score =  195 bits (495), Expect = 9e-54
 Identities = 180/658 (27%), Positives = 296/658 (44%), Gaps = 67/658 (10%)

Query: 24  GTIKASDKGFGFLEVDSK-TSYFVPPPYMKKCMHGDKVVAFIR--TENEREVAEPSELIE 80
           G + A+ +G+GFL  D      ++ P  M+  MHGD+V+A +       R     +E+++
Sbjct: 86  GVVLANAEGYGFLRPDEGGDDLYLSPQQMRAVMHGDRVLASVVGIDRRGRRQGAIAEVLQ 145

Query: 81  QSLTRFIGRVKLFKGKLNVAPDHPQLKKLSLKAKTKKGLNEADFQEGDWVVAHLVRHPLK 140
           +   R +GRV +  G   V PD    ++L+     K G  E   + G  VVA +   P  
Sbjct: 146 RRSPRLVGRVVIDNGVTLVTPDD---RRLNQDVMIKPG-RELGARSGQIVVAEITDPPTL 201

Query: 141 GDDGFFVQISHKITDANDKIAPWWVT---LAENDLPNSEPAGIDDWQLKDDADLV----- 192
                   I    T   +++ P  V    +A +DLP+  PA +    L+D A +      
Sbjct: 202 QRG----PIGEIRTVLGERLQPSLVVEMAIASHDLPHEWPAEV----LRDAAQVEPAVTA 253

Query: 193 -----REDLTALPFVTIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYITPEDEMDK 247
                R DL  LP VTIDG   +D DDA+YA+    G + L +AIAD + Y+   + +DK
Sbjct: 254 AEREGRTDLRQLPLVTIDGADARDFDDAVYAEPRRGGGWRLIVAIADVSHYVQVGNALDK 313

Query: 248 VARERGFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGDDIRFFAA 307
            A ER  + Y PG  +PMLP  L++ +CSL  +  R  + C + +  +G +    +F+ A
Sbjct: 314 EAFERSTSTYFPGFVVPMLPETLSNGICSLNPSVERLCMVCEMLVDTEGNVTKS-KFYDA 372

Query: 308 NIKSHARLVYDHVSDWLETGSSEQWQPSEEIAQV---VRDLYAFSQARANWRETHAVVFP 364
            + SHARL YD V  W   G  E      E+A V   +  L+A  +A A  R+    +  
Sbjct: 373 VMLSHARLTYDKV--WQAVGLREP-DARHEVADVLPQLEHLHALYKAMAGQRKRRGAIDF 429

Query: 365 DRPDYRFELSADNDVVAIHADMRRTANRLVEESMITANICAGKTLQTTFGFGVFNTHAGF 424
           + P+ +F L     V ++ A  R  A++L+EE MI AN+ A   L+      +F  H   
Sbjct: 430 ETPEVKFRLDQTGGVESMGATERNDAHKLIEECMIAANVQAALFLEKKKIPALFRAHEPP 489

Query: 425 KAEKMADVVELM--------AVNGAPNAD-AETLATVEGFAALRRWLATQETSYLDNRIR 475
            AEK  D+ + +         V+    AD AE LA V+            E   + + + 
Sbjct: 490 PAEKYEDLQQFLREFKLRMPPVDEVTPADFAEILALVQ---------ERPERELIQSVLL 540

Query: 476 KYQSYSEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAPVQ-TPDETV 534
           + QS +        HF + L  YA +TSPIR+Y D++ HR ++  + G  P   T     
Sbjct: 541 RAQSMAAYQPDNRGHFGLALQAYAHFTSPIRRYPDLLVHRAIRYALSGGKPSDYTYTSAE 600

Query: 535 GEELALH----RKHHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLEN 590
              +A+H     +  + AER+V +      +      E  F   +  +   G+ V L E+
Sbjct: 601 MAAMAIHCSQRERRAEEAERDVDERFKCAWMEKHIGSE--FDGVVTGVTSFGLFVELDES 658

Query: 591 GAMAFIPGALILDNKERIECNGEDGTVLIDKE---VVYKLGDVLEIVLTEVNQENRSL 645
                +  + ++++    +   +    L+  E     ++LGD + I +   + E+R +
Sbjct: 659 KVSGLVHISQLMNDYYHFDATRK----LLKGERTGAQFRLGDHVRIKVLRASLEDRKI 712