Pairwise Alignments

Query, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., Exoribonuclease II (EC 3.1.13.1) from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 9e-19
 Identities = 89/332 (26%), Positives = 130/332 (39%), Gaps = 76/332 (22%)

Query: 203 TIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYITPEDEMDKVARERGFTIYLPGRN 262
           +ID   T ++DDAL  Q L +G   + I IA P   +TP   +D VAR R  T+Y+PG  
Sbjct: 246 SIDDSQTTEIDDALSVQGLGSGTVTVGIHIAAPALALTPGSAIDNVARARMSTVYMPGYK 305

Query: 263 IPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVI----GDDIRF----FAANIKSHAR 314
           I MLP D+ +   +L+E   RPA+  S+  R D       G + +       AN++ H +
Sbjct: 306 ITMLPDDVVNTY-TLLEGGDRPAV--SLYARFDEATLELQGTETKLERVPIVANLR-HDQ 361

Query: 315 LVYDHVSDWLETGSSEQWQPSEEIAQVVRDLYAFSQARANWRETHAVVFP-----DRPDY 369
           L       WLE  S +     E  AQ+   L    +     +    VV       +RPDY
Sbjct: 362 LDTFVTQPWLEDASFQSEGTPEAAAQLRAPLSFLFRLAKQLKAQREVVRGKPENFNRPDY 421

Query: 370 RFELSAD-------NDVVAIHADMR-RTANRLVEESMITANICAGKTLQTTFGFGVFNTH 421
            F L  +       N+ V I    R    + +V E+MI AN   G  L      G++ + 
Sbjct: 422 NFRLVGNEGNEPTGNEQVQISTRQRGAPLDLIVSEAMILANSSWGGWLGELGVPGLYRSQ 481

Query: 422 AGFKAEKMADVVELMAVNGAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQSYS 481
           A                  AP                                       
Sbjct: 482 ASL----------------APGIKV----------------------------------- 490

Query: 482 EIGNQPLPHFAMGLDVYATWTSPIRKYGDMIN 513
            +G + LPH  +G+  YA  TSP+R+Y D++N
Sbjct: 491 RMGTRALPHAGLGVKSYAWSTSPLRRYTDLVN 522