Pairwise Alignments

Query, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

 Score =  172 bits (435), Expect = 7e-47
 Identities = 128/460 (27%), Positives = 216/460 (46%), Gaps = 27/460 (5%)

Query: 193 REDLTALPFVTIDGESTKDMDDALYAQQLPNGD----FALTIAIADPTAYITPEDEMDKV 248
           RED   LP +TID    KD DDA+YA+  P+ D      +T+AIAD + Y+ P   +D+ 
Sbjct: 288 REDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGVIVTVAIADVSWYVRPGAPLDRE 347

Query: 249 ARERGFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGDDIRFFAAN 308
           A +RG ++Y P R +PMLP  ++++LCSL E   RPAL   +T  K+G       F    
Sbjct: 348 ALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRMTFSKEGRKASHT-FHRIM 406

Query: 309 IKSHARLVYDHVSDWLETGSSEQWQPSEEIAQVVRDLYAFSQARANWRETHAVVFPDRPD 368
           +KS A+L Y      ++    ++      +  +++ L+   +     R+    +  D P+
Sbjct: 407 MKSAAKLSYQQAQAAIDGNPDDK--TGTLLEPILKPLWHAYEVMKRGRDRRQPLELDMPE 464

Query: 369 YRFELSADNDVVAIHADMRRTANRLVEESMITANICAGKTLQTTFGFGVFNTHAGFKAEK 428
            + +L  D  V  +    R  A++L+EE MI AN+ A +TL+T     V+  H      K
Sbjct: 465 RKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETLETKKQRLVYRVHDAPTLSK 524

Query: 429 MADVVELMAVNGAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQSYSEIGNQPL 488
              + E +   G   A    +        L R L T     ++  + + QS +    + +
Sbjct: 525 QEVLREFLGTIGISMAKGVAMRANSFNGILARALDTPHQIMVNEMVLRSQSQAIYSPENI 584

Query: 489 PHFAMGLDVYATWTSPIRKYGDMINHRLLKAHI-LGKAPVQTPDET----VGEELALHRK 543
            HF + L  YA +TSPIR+Y D+I HR L   + LG+  +   +E     +  E++   +
Sbjct: 585 GHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGLGEGGITPQEEATLDDIAAEISTFER 644

Query: 544 HHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLENGAMAFIPGALI-- 601
               AER+  + L A  L++   +E  F+  +  + + G+ V L + GA  F+P + +  
Sbjct: 645 RAMAAERDTVNRLIAHHLSERVGEE--FEGRVGGVTKAGLFVALPQFGADGFVPISTLGT 702

Query: 602 ----LDNKERIECNGEDGTVLIDKEVVYKLGDVLEIVLTE 637
                D   +     + G       + Y+LGD +++ L E
Sbjct: 703 DYFFYDEAHQALTGEKTG-------LGYQLGDTVQVRLAE 735