Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., ATP-dependent RNA helicase from Rhodanobacter sp. FW510-T8

 Score =  478 bits (1231), Expect = e-139
 Identities = 271/607 (44%), Positives = 370/607 (60%), Gaps = 24/607 (3%)

Query: 25  AIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPL 84
           A  F+ L L+  +L AL ++G+ SP+PIQAA IP L+EGRD LG+AQTGTGKTAAF+LP+
Sbjct: 12  AAGFTALGLDPNVLRALADVGYESPSPIQAATIPPLMEGRDVLGQAQTGTGKTAAFALPI 71

Query: 85  LNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKS 144
           L++L+L   KPQA+V+APTRELAIQVA   +     + GL+VL IYGG S   Q+ +LK 
Sbjct: 72  LSRLDLKPGKPQALVLAPTRELAIQVAEAFQRYATYLPGLQVLPIYGGQSYGPQLHSLKR 131

Query: 145 GAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRV 204
           G H+VVGTPGRV D + +  L L E    +LDEADEML+MGF+DDV  +++  P   Q  
Sbjct: 132 GVHVVVGTPGRVIDHLDKRTLDLSELKYLVLDEADEMLRMGFIDDVEKVLQATPPGRQVA 191

Query: 205 LFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEE 264
           LFSATMP  +++I +R L+ P  V +  S  T A + Q+YW V G+ K +AM R+LE E 
Sbjct: 192 LFSATMPAPIRKIAQRHLKEPVEVTIKSSTTTAANIHQRYWFVSGMHKLDAMTRILEAEP 251

Query: 265 TDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDV 324
            DA I+F RT+Q TE LA  L ARG  AAA++GDI Q  RER +  +K G +DILVATDV
Sbjct: 252 FDAMIIFARTKQATEELAGKLQARGLAAAAINGDIAQPQRERVIQQLKDGKLDILVATDV 311

Query: 325 VARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVT 384
            ARGLDV RI+HV NYDIP+D ESY+HRIGRTGRAGR G+AIL V   +  ML  IER T
Sbjct: 312 AARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLHAIERAT 371

Query: 385 RSSMEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAAI 444
           R  +E++QLP  + V + R+ K  Q ++       L +F  L+E+ +    + A  +AA 
Sbjct: 372 RQPIEQMQLPSVEVVNDVRIGKFKQRISDMLAQGDLGQFQQLIEQYEQEHNVPAVEIAAA 431

Query: 445 LLKRQQGKRPLFYVGADPMIEAMEREKSRRRERRDDRRDGDRPARREFGGRDQEN----- 499
           L +  QG +PL    A P     E+ ++  RE +   RD    A RE      EN     
Sbjct: 432 LARIAQGDQPLLL--APP--PKREKHEAATREHKPRERDSASRAPREHKPHAHENAPPRE 487

Query: 500 --------HDWD----TYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFV 547
                   H  +    TY+++VG + GV+  +I+GA+ANE GL    IG + +   ++ +
Sbjct: 488 GAHRPVRAHATEQGKRTYRIEVGHEHGVKPGNIIGAIANEAGLDSQFIGRLSIRDHYSLI 547

Query: 548 QLPKAMSNDVSSKLRKLRIRQKEVGAVVCDFDDFRESRGGARREGGPRREGGRRPEGNRE 607
            LP  M  +V   L+K+ + Q+++     D  D   S   A + GG ++ GG +P   R 
Sbjct: 548 DLPDGMPKEVFEHLKKVWVVQQQLRIHEWDGSDTGTSAPPAHKPGGFKKPGGFKP---RP 604

Query: 608 GGFRGGR 614
           GG +  R
Sbjct: 605 GGAKPPR 611