Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score =  271 bits (692), Expect = 7e-77
 Identities = 150/371 (40%), Positives = 221/371 (59%), Gaps = 10/371 (2%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           FS+L+L   +  A+ EMG+ + TPIQ  AIPV+L G+D +G AQTGTGKTAAFSLPLL +
Sbjct: 5   FSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQR 64

Query: 88  L--------NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQM 139
           +        + +++  +A+V+ PTRELA QVA +IK L      L+   ++GG  +  Q 
Sbjct: 65  MLKHENASTSPARHPVRALVLLPTRELADQVAQQIK-LYAKYTNLRSTVVFGGIDMKPQT 123

Query: 140 RALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE 199
             LK G  ++V TPGR+ D I      L++    +LDEAD ML +GF+ D+  I+   P+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPK 183

Query: 200 SAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARL 259
               +LFSAT  P +K +   +L+NP  ++VA  N+T + VEQ ++ V   +K  A+ ++
Sbjct: 184 QRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALKQI 243

Query: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319
           +       + VFV ++    RLA  L   G +  ALHGD  Q  R + +   K G +D+L
Sbjct: 244 VRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVDLL 303

Query: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVR-TNQIRMLR 378
           V TDV ARGLD+  +  V+N+DIPF+ E Y+HRIGRTGRAG  G A+      N  R++ 
Sbjct: 304 VCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARLVA 363

Query: 379 TIERVTRSSME 389
            IE++ +  +E
Sbjct: 364 DIEKLIKKKIE 374