Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  273 bits (698), Expect = 2e-77
 Identities = 141/375 (37%), Positives = 227/375 (60%), Gaps = 11/375 (2%)

Query: 26  IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
           + F+ L L+ A++ A+   G+  PTP+Q  AIP +L+GRD +  AQTGTGKT  F+LP+L
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 86  NKLNLSQY----------KPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135
            +L  + +          +P+ +V+ PTRELA QV    K   +++  +    I+GG  +
Sbjct: 61  ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSAC-IFGGVGM 119

Query: 136 LDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIME 195
             Q++A+  G  ++V  PGR+ DL  + ++ L      +LDEAD ML MGF+ DV  ++ 
Sbjct: 120 NPQIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLA 179

Query: 196 QAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEA 255
           + P   Q +LFSAT    + ++ ++ L NPE ++V   N TV ++EQ+ + +    K   
Sbjct: 180 RLPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRAL 239

Query: 256 MARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGV 315
           +A L+     +  +VF RT+    RLA++L  +G  AAA+HG+  Q+ R + +   K   
Sbjct: 240 LAHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANS 299

Query: 316 IDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIR 375
           + +LVATD+ ARGLD+ ++ HV N+++P   E Y+HRIGRTGRAGR G+AI LV  ++ +
Sbjct: 300 VRVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEK 359

Query: 376 MLRTIERVTRSSMEE 390
           +L++IERVT+  + +
Sbjct: 360 LLKSIERVTKQRIAD 374