Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., ATP-dependent RNA helicase RhlE from Pseudomonas lactucae CFBP13502

 Score =  273 bits (698), Expect = 2e-77
 Identities = 146/385 (37%), Positives = 227/385 (58%), Gaps = 11/385 (2%)

Query: 26  IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
           + F+ L L+ A++ A+   G+  PTP+Q  AIP +L+GRD +  AQTGTGKT  F+LP+L
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 86  NKLNLSQY----------KPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135
            +L  + +          +P+ +V+ PTRELA QV    K   +++K +    I+GG  +
Sbjct: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSAC-IFGGVGM 119

Query: 136 LDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIME 195
             Q++A+  G  ++V  PGR+ DL  +  + L      +LDEAD ML MGFV DV  ++ 
Sbjct: 120 NPQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179

Query: 196 QAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEA 255
           + P   Q +LFSAT    +  +  + L NPE ++V   N TV ++EQ+ + +    K   
Sbjct: 180 RLPAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRSL 239

Query: 256 MARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGV 315
           +A L+     +  +VF RT+    RLA++L   G  A A+HG+  Q+ R + +   K G 
Sbjct: 240 LAHLITHGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGS 299

Query: 316 IDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIR 375
           + ILVATD+ ARGLD+ ++ HV N+++P   E Y+HRIGRTGRAGR G+AI LV  ++ +
Sbjct: 300 VRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEK 359

Query: 376 MLRTIERVTRSSMEEIQLPHRDKVA 400
           +L++IER+T+  + +  L   D  A
Sbjct: 360 LLKSIERMTKQKIADGDLMGFDSSA 384