Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  279 bits (714), Expect = 2e-79
 Identities = 151/370 (40%), Positives = 224/370 (60%), Gaps = 9/370 (2%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           FS+L+L+ AI  A+ EMG+ + TPIQA AIPV+L+GRD +G AQTGTGKTAAF+LPLL +
Sbjct: 5   FSELSLSPAIERAVAEMGYATMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFTLPLLQR 64

Query: 88  L--------NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQM 139
           +        + +++  +A+V+ PTRELA QVA ++K L      L+   ++GG  +  Q 
Sbjct: 65  MLKHENASTSPARHPVRALVLLPTRELADQVAEQVK-LYAKYTNLRSTVVFGGMDMKPQT 123

Query: 140 RALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE 199
             LK G  ++V TPGR+ D I      L++    +LDEAD ML +GF+ D+  I+   P+
Sbjct: 124 AELKKGVEVLVATPGRLLDHIEAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPK 183

Query: 200 SAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARL 259
               +LFSAT  P +K +   +L++P  ++VA SN T + VEQ ++ V+  +K   + ++
Sbjct: 184 QRTTLLFSATFSPEIKRLANSYLQDPVTIEVARSNATASTVEQHFYRVEDDDKRGILKQI 243

Query: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319
           L       + VFV ++    RLA  L   G    ALHGD  Q  R + ++  K G +D+L
Sbjct: 244 LRERGLKQAFVFVNSKLGCARLARSLEREGLNTTALHGDKSQDERLKALEAFKTGAVDLL 303

Query: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379
           V TDV ARGLD+  +  V+N+DIPF+ E Y+HRIGRTGRAG  G A+  V     R++  
Sbjct: 304 VCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFVSGRDTRLMGD 363

Query: 380 IERVTRSSME 389
           +E++    +E
Sbjct: 364 LEKLLGKKLE 373