Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  292 bits (748), Expect = 2e-83
 Identities = 172/477 (36%), Positives = 258/477 (54%), Gaps = 10/477 (2%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           F DL L   IL AL E G+  PTPIQA AIPV+L GRD LG AQTGTGKTA+F+LP++  
Sbjct: 20  FEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIEI 79

Query: 88  LNLSQYK---PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKS 144
           L   + K   P+++++APTRELA QVA      G+    LK   I GG S+ DQ+  L  
Sbjct: 80  LAAGRAKARMPRSLILAPTRELAAQVAENFDKYGK-YHPLKKALIIGGESMSDQVALLDR 138

Query: 145 GAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRV 204
           G  +++ TPGR+ D+  R R+ L++    ++DEAD ML MGF+ DV  I+   P+  Q +
Sbjct: 139 GVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQTL 198

Query: 205 LFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEE 264
            FSATM P ++ + + FL NP+ V V+        V Q   VV+ ++K E +  L+  EE
Sbjct: 199 FFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIEE 258

Query: 265 TDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDV 324
              + +F   ++D + L   L   GF    LHGD+ QS R  T++  K+G   ++V +DV
Sbjct: 259 VKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEARLMVCSDV 318

Query: 325 VARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVT 384
            ARG+D+  ++HV+N+D+P   E Y+HRIGRTGRAG +G A  +   +  R +  IE + 
Sbjct: 319 AARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAMI 378

Query: 385 RSSMEEIQ---LPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTL 441
            +++  I    +P  D    +R  + G+    D +  +  +  +   + +     D   +
Sbjct: 379 GTTIPRISVEGVPALDLDMTARKGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAPV 438

Query: 442 AAILLKRQQGKRPLFYVGADPMIEAMEREKSRRRERRDDRRDGDRPARREFGGRDQE 498
           A            +      P  E  ER + R R+R + RRD  R      GGR+++
Sbjct: 439 AEAAPVEAAAPEEVI---ERPREERPERSRGRGRDREEPRRDEPRREEPRRGGRNRD 492