Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dianthicola ME23

 Score =  503 bits (1294), Expect = e-146
 Identities = 291/647 (44%), Positives = 397/647 (61%), Gaps = 33/647 (5%)

Query: 21  MQDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAF 80
           M +    F+ L L++ ILSAL+E+G+  P+PIQA  IP LL GRD LG AQTG+GKTAAF
Sbjct: 1   MAEFETSFASLGLSAPILSALSELGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF 60

Query: 81  SLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMR 140
           SLPLLN +      PQ +V+APTRELA+QVA       ++++G+ V+ +YGG     Q+R
Sbjct: 61  SLPLLNNIKAELKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLR 120

Query: 141 ALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPES 200
           AL+ G  IVVGTPGR+ D + R  L L      +LDEADEML+MGF++DV  IM Q P  
Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAE 180

Query: 201 AQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLL 260
            Q  LFSATMP  ++ I  RF+++P+ V +  S  T   + Q YW V G+ K+EA+ R L
Sbjct: 181 HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFL 240

Query: 261 ETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV 320
           E E+ DA+I+FVRT+  T  +A+ L   G+ +AAL+GD+ Q+LRE+T++ +K G +DIL+
Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI 300

Query: 321 ATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTI 380
           ATDV ARGLDV RI+ V NYDIP D ESY+HRIGRTGRAGR G+A+L V   + R+LR I
Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360

Query: 381 ERVTRSSMEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATT 440
           ER  + ++ E+ LP+ + + + RL +   ++    E S L+ +  L+ KL+   E+D  T
Sbjct: 361 ERTMKLTIPEVDLPNAELLGQRRLAQFAAKVQQQLESSDLDMYRALLGKLRPQEELDIET 420

Query: 441 LAAILLKRQQGKRPLFY---VGADPMIEAMEREKSRRRERRDDRRD------GDRPARRE 491
           LAA LLK  QG+RPL       A+       RE+  R ERR DR +       +RPARRE
Sbjct: 421 LAAALLKMAQGERPLVLPPESAAERRPRREFRERDERFERRGDRNERAPRSSDERPARRE 480

Query: 492 FGGRDQENHDWDTYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFVQLPK 551
                ++  + D Y+++VGRD GV+V+ IVGA+ANE  ++   IG IKL   H+ ++LPK
Sbjct: 481 ----RRDVGEMDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPK 536

Query: 552 AMSNDVSSKLRKLRIRQKEVGAVVCDFDDFRESRGGARREGGPRREGGRRPEGNREGGFR 611
            M  D+ S   + RI  K +   +       +++   RRE   RREGG R E +   GF 
Sbjct: 537 GMPGDLLSHFTRTRILNKPMNMQL-----MGDAQPHERRE---RREGGERGERSGARGF- 587

Query: 612 GGREGGREGGRGRGGEGRPFREGERRFERNRSGESSGSYRGERGHSR 658
                G   G G  G GRPF  GERR      GE  GS  G+R   R
Sbjct: 588 -----GERAGTG-SGRGRPF-NGERR----EGGERRGSRDGQRAPRR 623