Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  369 bits (946), Expect = e-106
 Identities = 209/556 (37%), Positives = 330/556 (59%), Gaps = 14/556 (2%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           F+DL +++ IL A+  MG+  P+ IQA +IP++LEG D +G+AQTGTGKTA+F +P++++
Sbjct: 7   FADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGIPIVDR 66

Query: 88  LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
           ++ S  +PQA+++ PTRELA+QV  EI  L +  KG+    IYGG +I  Q+R LK G  
Sbjct: 67  VDSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTLKRGVQ 126

Query: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
           IVVGTPGRV D + R  L LD   T +LDEADEML MGF +D+  ++ Q PE  Q + FS
Sbjct: 127 IVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQTIFFS 186

Query: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEETDA 267
           ATM   + ++  ++  NPE V +     TV  + Q Y+ VK   K E + RL+   + + 
Sbjct: 187 ATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINIHQFNL 246

Query: 268 SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVAR 327
            +VF  T++ T+ + + L ARG  A ALHGD+ Q+ R++ ++  ++G   +LVATDV AR
Sbjct: 247 GVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVATDVAAR 306

Query: 328 GLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAI-LLVRTNQIRMLRTIERVTRS 386
           G+DV  +  V+NYD+P D E Y+HRIGRTGRAGR G AI  +     I  L+ +ER  ++
Sbjct: 307 GIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFRLKDLERYIKT 366

Query: 387 SMEEIQLPHRDKVAESRLTKLGQEL--AADKEFSSLERFADLVEKLQASLEIDATTLAAI 444
           ++ ++  P   ++ + +  +L +E+  +  KE  +    A L + L   L +D   L  +
Sbjct: 367 TLTKMNPPSVAEMIDQKKDQLVKEVTTSLSKEEDNQVFEAALGQMLAEGLSMDQIALGLV 426

Query: 445 LLKRQQGKRPLFYVGADPMIEAMEREKSRRRERRDDRRD-------GDRPARREFGGRDQ 497
            L+  +  + L  +  D  +   +R++  R  R  DR +       GDRPA R+ GGR++
Sbjct: 427 KLQMGKSIQELSDMNFDLNL-GRDRDRGERGGRGRDRFERGGRKGRGDRPAGRK-GGRER 484

Query: 498 ENHDWDTYQ--LQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFVQLPKAMSN 555
              + +  +  L +G+   ++  DIVGA+A E G++   IG I +    +FV +P   ++
Sbjct: 485 GRREANMSRLFLNLGKKDRIRPNDIVGAIAGEAGISGRLIGGIDIFDNFSFVDVPSKDAS 544

Query: 556 DVSSKLRKLRIRQKEV 571
            V + +++  I+ K V
Sbjct: 545 HVINVMKRNTIKGKPV 560