Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., ATP-dependent RNA helicase from Caulobacter crescentus NA1000 Δfur

 Score =  277 bits (708), Expect = 1e-78
 Identities = 178/500 (35%), Positives = 272/500 (54%), Gaps = 32/500 (6%)

Query: 27  QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
           +F+DL L+   L A+ + G+ + TPIQA AIPV L G+D LG AQTGTGKTAAF+LPL++
Sbjct: 3   EFTDLGLSPTTLQAVADTGYTTATPIQAQAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62

Query: 87  KLNLSQYK---PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALK 143
           +L   + K   P+A+V+APTRELA QVAA  +   +  K L    + GG S  DQ + L 
Sbjct: 63  RLQSGRAKARMPRALVIAPTRELADQVAASFEKYAKGTK-LSWALLIGGVSFGDQEKKLD 121

Query: 144 SGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQR 203
            G  +++ TPGR+ D   R +L +      ++DEAD ML MGF+ D+  I +  P   Q 
Sbjct: 122 RGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQT 181

Query: 204 VLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE---KDEAMARLL 260
           + FSATMPP +  + ++FLR+P  ++VA    T A + Q    V   +   K  A+  L+
Sbjct: 182 LFFSATMPPEITRLTKQFLRDPVRIEVARPATTNANITQLLVKVPSSDPKAKRLALRALI 241

Query: 261 ETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV 320
           E    +  IVF   + + + +A  L   G+ AA +HGD+ Q+ R +T+   + G + ILV
Sbjct: 242 EKAGIETGIVFCNRKTEVDIVAKSLKVHGYDAAPIHGDLDQTQRMKTLADFRSGALKILV 301

Query: 321 ATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTI 380
           A+DV ARGLD+P ++HV+NYD+P   + Y+HRIGRTGRAGR G   +LV     +    +
Sbjct: 302 ASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRTGITYMLVTPADDKGFDKV 361

Query: 381 ERVTRSSMEE--IQLPHRDKVA---ESRLTKLGQELAADKEFSSLERFA----DLVEKLQ 431
            ++  S+ +E  + L + + V    E    + G++    +     ER A       E+ +
Sbjct: 362 IKLIGSTPDEEKLDLDYSNAVTVKREGDRKRGGRDRDRGERGERSERPARGRGRGRERAE 421

Query: 432 ASLEIDATTLAAIL----------LKRQQGKRPLFYVGADPMIEAMEREKSRRRERRDDR 481
            ++E  A  +A I+           + ++ +R      A P   A+E E+  R ER    
Sbjct: 422 ETVEAPAEAVAEIVDTPAMAEERPARERRPRREREPKAAAPAPTAVEAERPARAER---- 477

Query: 482 RDGDRPARREFGGRDQENHD 501
              +RP R     RD+++ D
Sbjct: 478 --PERPVRGVQPVRDRDDDD 495