Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., Phage integrase, site-specific serine recombinase from Sphingobium sp. HT1-2

 Score = 69.7 bits (169), Expect = 5e-17
 Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 122 GYGRVSTDEQTTSQQLTAIREAG--HKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLE 179
           GY RVST EQ  + QL A+R+AG     SD         +G   A+          +   
Sbjct: 4   GYARVSTSEQDLTPQLDALRDAGCERTFSDKASGAKANRAGLAEAL----------SHAR 53

Query: 180 KGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFA 239
            GD LV+ KLDRLGR    +  +   L + GI L  +   + D +   GKL+  + A  A
Sbjct: 54  AGDVLVVWKLDRLGRTMKGLVDLAAELAENGIGLRSITDGI-DTAGAAGKLVFHILAAMA 112

Query: 240 EFEKNRISERIRDKLKQLKQEGKALGRP---TKNVYDDVQELKAQGISQRTIADKLNVSL 296
           E E++   ER    L   ++EG+  GR    T    +  ++L A G++ R IA  + VS+
Sbjct: 113 EMERDLNRERTTAALIVARREGRVGGRKTVMTPKRLEAARKLLASGMTIREIAPTIGVSV 172

Query: 297 STVRRN 302
            T+ R+
Sbjct: 173 PTLYRH 178