Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., Phage integrase, site-specific serine recombinase from Sphingobium sp. HT1-2

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 12/185 (6%)

Query: 122 GYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKG 181
           GY RVST +Q  + Q+ A++ AG    + +F   +  SG    + RP     ++     G
Sbjct: 4   GYARVSTADQDLTPQIEALQRAG---CERQF--SDKASG--ARVNRPGLAEAID-YARPG 55

Query: 182 DTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEF 241
           D +V+ KLDRLGR    +  +   L  K I L  +   + D S   G+L+  + A  A+ 
Sbjct: 56  DVIVVWKLDRLGRTMKGLVDLAAELEGKQIGLRSITDGI-DTSGTAGRLVFNILAAMAQM 114

Query: 242 EKNRISERIRDKLKQLKQEGKALGR---PTKNVYDDVQELKAQGISQRTIADKLNVSLST 298
           E+  + ER    L   +++G+  GR    T+      ++L    +S   IA  + VS+ST
Sbjct: 115 ERELVRERTNAALDVARRKGRFGGRRSVMTEQRRAAAEKLLKTEMSATEIASAIGVSIST 174

Query: 299 VRRNW 303
             R++
Sbjct: 175 FYRHF 179