Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Serine recombinase, PinQ/PinR-type from Sphingobium sp. HT1-2

 Score =  129 bits (323), Expect = 9e-35
 Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 5/186 (2%)

Query: 119 RTYGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKL 178
           R + Y RVST +QTT  Q+  I  AG  V   R IV E VSG V AMER  F  L+  +L
Sbjct: 42  RAFAYCRVSTGDQTTENQVREITAAGFAVEGRR-IVSETVSGSVAAMERKGFAELMR-RL 99

Query: 179 EKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATF 238
           E GD L++ KLDRLGR+ +DV+  V++L  +G+++  L L   DL S  GK+ + + A  
Sbjct: 100 EDGDILIVTKLDRLGRNAMDVRATVELLAAEGVRVHCLALGGVDLCSAAGKMTMGVIAAV 159

Query: 239 AEFEKNRISERIRDKLKQLKQEGKALGRP---TKNVYDDVQELKAQGISQRTIADKLNVS 295
           AEFE++ + ER +  LK+ K  GK LGRP   T +   D+   + QG S   +A +  VS
Sbjct: 160 AEFERDLLIERTQSGLKRAKAAGKVLGRPQALTPDQQKDIITRRGQGASLGVLAKEYKVS 219

Query: 296 LSTVRR 301
            + ++R
Sbjct: 220 RAAIQR 225