Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., site-specific DNA recombinase from Pseudomonas putida KT2440

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 11/183 (6%)

Query: 122 GYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKG 181
           GY RVST  Q    Q   + ++G        I +E +SG    MERP    L+++ L  G
Sbjct: 4   GYARVSTSGQDLELQRQLLTQSGCAR-----IFEEKISGA--KMERPELMRLLDH-LRPG 55

Query: 182 DTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEF 241
           D +V+++LDRL R  ID+  + + L   G  L  L  P  + ++  G++++ +FA  A F
Sbjct: 56  DVVVVSRLDRLARSTIDLLSIAEQLNRLGAGLQSLSEPWLNTTTAAGQMIMTIFAGIASF 115

Query: 242 EKNRISERIRDKLKQLKQEGKALG---RPTKNVYDDVQELKAQGISQRTIADKLNVSLST 298
           E++ I +R R   +  +++G   G   R +K   +  + L   G S   IA  L V  +T
Sbjct: 116 ERSLIVDRTRAGREAAQRKGIKFGPKPRLSKEQIEHAEMLVVAGKSVAQIAGLLGVHRAT 175

Query: 299 VRR 301
           + R
Sbjct: 176 LYR 178