Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., Rac prophage; predicted site-specific recombinase (NCBI) from Escherichia coli BW25113

 Score =  116 bits (291), Expect = 4e-31
 Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 5/186 (2%)

Query: 119 RTYGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKL 178
           R + Y R+ST +QTT  Q   I  AG K+   + I++E +SG     ERP F  L+  +L
Sbjct: 3   RIFAYCRISTLDQTTENQRREIESAGFKIKPQQ-IIEEHISGSAATSERPGFNRLLA-RL 60

Query: 179 EKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATF 238
           + GD L++ KLDRLG + +D+++ V+ LT+ GI++  L L   DL+SP GK+M+Q+ +  
Sbjct: 61  KCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAV 120

Query: 239 AEFEKNRISERIRDKLKQLKQEGKALGRP---TKNVYDDVQELKAQGISQRTIADKLNVS 295
           AEFE++ + ER    + + +  GK  GRP    +     V E    G+S   IA +   S
Sbjct: 121 AEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTS 180

Query: 296 LSTVRR 301
             T+ R
Sbjct: 181 RQTILR 186