Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., CP4-6 prophage; DNA-binding protein (NCBI) from Escherichia coli BW25113

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 7/187 (3%)

Query: 119 RTYGYGRVSTDEQTTSQQLTAIREAGHKVSD-NRFIVDEGVSGGVCAMERPAFRNLVENK 177
           R++ Y   S+++Q +     ++ E   K +     +V E V       E+   R L+ ++
Sbjct: 45  RSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHE 104

Query: 178 LEKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFAT 237
           + + DTLVI  L  LGR   D+Q ++     K  ++FI     A    P  +  L     
Sbjct: 105 MNRQDTLVIPDLSCLGRTVEDLQNILFFCLQK--EMFIYSYHPASRIEPSAESCLSFLIA 162

Query: 238 FAEFEKNRISERIRDKLKQLKQEGKALGRPTKNVYD-DVQELKAQGISQRTIADKLNVSL 296
             +       +  + + + +K   K LGR   + Y  D+  LK  G +Q  IA KL++SL
Sbjct: 163 RQDTIDIHNLKSTKSRYRHVK---KKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISL 219

Query: 297 STVRRNW 303
           STV+R+W
Sbjct: 220 STVKRHW 226