Pairwise Alignments

Query, 459 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 19/156 (12%)

Query: 278 LEVRTALINRGLKTLTVNGYMQDIRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTE 337
           LE  T   +  +   TVN ++ +I+ I+    A  LI      +L     + K P+ +  
Sbjct: 290 LEALTNENDEKIAKATVNRHISNIKQIWKWLAAQRLIKHDSTGELRTTKGEQKHPRQVLT 349

Query: 338 SEVIALIDYFK----HGYFTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDI 393
           S+ I  I   K    HG           +  M +  W+P I   TGAR  EI QL   DI
Sbjct: 350 SDDIKNIFILKAEEIHG---------GDMNSMNF--WLPWIGLYTGARRGEIAQLTPNDI 398

Query: 394 RQSANGLCWYID-INDRG---DNVVKNKSSNRIVPL 425
           R  A   C++I+ + D G   +  +K  +S R+VP+
Sbjct: 399 RMYAGVECFHIETLEDNGAISEKTIKTNASKRVVPV 434