Pairwise Alignments

Query, 459 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 47.0 bits (110), Expect = 8e-10
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 23/145 (15%)

Query: 284 LINRGLKTLTVNGYMQDIRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTESEVIAL 343
           L+ +GL   TVN  M  +R+ +      G I K P  KL       K P+ + ES +  L
Sbjct: 58  LVEQGLSATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQL 117

Query: 344 IDYFKHGYFTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDIRQSANGLCWY 403
           ++  ++    E +R K  +E + YL         TG RL+E++            GL W 
Sbjct: 118 LNDLEYEAGFEGQRDKMVMEFL-YL---------TGVRLSELI------------GLTWK 155

Query: 404 -IDINDRGDNVVKNKSSNRIVPLVD 427
            IDI  +   V   +   RI+PL +
Sbjct: 156 DIDIQGKTVKVYGKRKKQRIIPLTN 180