Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 4e-62
 Identities = 140/436 (32%), Positives = 229/436 (52%), Gaps = 10/436 (2%)

Query: 187 QEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHE-ELAVIHIGFANAR 245
           ++I K++  E+Q+    SHD  TG LNR +LE +L        + + +LAV++I     +
Sbjct: 293 RDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYIDLDGFK 352

Query: 246 QLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLCHRL 305
            +   +G++  D VL ++ +RL           R       ++L     D     +  RL
Sbjct: 353 SINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAVPVAERL 412

Query: 306 IHAGQAQFVTEGLPVHLNPYIGVALSR-ETRDPQQLLRHAVSSMLACKDSGYKVF-FHSP 363
           + +    +  +G+ +H++  IG+ +S      P +L++ A  +M   K  G   F +++ 
Sbjct: 413 LASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRNNFQWYTS 472

Query: 364 ALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEFSNE 423
            L         L N L +A++     L++QP++  +T+R VG EALLRW+HPV G  S  
Sbjct: 473 DLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPA 532

Query: 424 TLIHMAEQNGLIFEVGHFVLHQALKAASDWLAVCPT----FCIAINVSSVQLKNSGFVEQ 479
             I +AE +G I  +  +VL  A     D   +C        +A+N+S +  +   FVE 
Sbjct: 533 VFIPVAEDSGQIIPLSLWVLDTACAQLRD---LCDQGFNGISMAVNISPMHFQCGQFVEC 589

Query: 480 IRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQYL 539
           I+ +L+ +   A QLELEITES L+ +   A   L+RL  LGV ++LDDFGTG++S  YL
Sbjct: 590 IQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYL 649

Query: 540 KKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQG 599
           K  P D IKID+SF++ I  +  D  I + ++ +A  L+L+VV EG+E+  Q  F+    
Sbjct: 650 KCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGR 709

Query: 600 CDVGQGFLYGKPMPSE 615
           CD+ QG+ + +PM  E
Sbjct: 710 CDILQGYYFARPMSHE 725



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 72  CETVVNTRQILLVSNADLDPLWKDNPDLELG--MRAYCGVPLQWPNGELFGSLCVTDRQA 129
           C T    R++++ ++   DP W+    L LG  +R+   +PL    G + G+  +   QA
Sbjct: 90  CGTAAFRRELVVTADIARDPSWERFRSLALGYNLRSCWSLPLLSHEGSVLGTFALYQDQA 149