Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

 Score =  219 bits (558), Expect = 3e-62
 Identities = 113/218 (51%), Positives = 159/218 (72%)

Query: 4   SIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSE 63
           +I++ + + K V+ +   L IL+ ++ ++ A E+ AIVGASG+GKSTL++++AGLDTP+ 
Sbjct: 8   AIVAVEHVFKSVTDSAGTLDILQDIHFTLGARETAAIVGASGSGKSTLLSIIAGLDTPTR 67

Query: 64  GEVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGEAEDRER 123
           G V L G  L  +D++ RAA+R++ VGFVFQSF L+ +LSALENV LP  L    + R+ 
Sbjct: 68  GTVRLAGDDLFAIDEDERAAVRAQRVGFVFQSFQLLGNLSALENVMLPLELANRKDARKA 127

Query: 124 AQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKVI 183
           A ++L  VGL  R+ H P  LSGGEQQRVA+ARAF++ P +L ADEPTG+LD  T  +V+
Sbjct: 128 ATEMLGRVGLGQRLGHYPKVLSGGEQQRVALARAFVVQPALLLADEPTGSLDFATGEQVM 187

Query: 184 DLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGEL 221
            L+F+LNRE GTTLVLVTHD  +A RC+RR  ++AG +
Sbjct: 188 KLMFDLNRELGTTLVLVTHDRGIADRCERRITIEAGRV 225