Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  204 bits (519), Expect = 1e-57
 Identities = 106/223 (47%), Positives = 150/223 (67%), Gaps = 2/223 (0%)

Query: 1   MQTSIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDT 60
           M   ++   +L K          +L  V+ S+  GE +AIVG+SG+GKSTL+ LL GLDT
Sbjct: 1   MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60

Query: 61  PSEGEVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLL--KGEA 118
           P+ G+V   G+P+S+L   A+A LR++ +GF++Q   L+P  +ALENV +P L+  K  A
Sbjct: 61  PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120

Query: 119 EDRERAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQET 178
           E   RA ++LKAVGL+HR +H P++LSGGE+QRVAIARA + +P+++ ADEPTGNLD   
Sbjct: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180

Query: 179 AAKVIDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGEL 221
           A  +  LL ELNR  GT  ++VTHD +LA+R  R+  M+ G L
Sbjct: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223