Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., lipoprotein-releasing ABC transporter ATP-binding protein LolD from Dickeya dianthicola ME23

 Score =  198 bits (503), Expect = 8e-56
 Identities = 105/223 (47%), Positives = 146/223 (65%), Gaps = 2/223 (0%)

Query: 5   IISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEG 64
           ++  + L K          +L+ V+  +Q GE +AIVG+SG+GKSTL+ LL GLD P+ G
Sbjct: 6   LLQCRQLCKRYQEGNLSTDVLRDVSFDMQQGEMMAIVGSSGSGKSTLLHLLGGLDAPTSG 65

Query: 65  EVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGEA--EDRE 122
           EV   GK L+QL   A+AALR+  +GF++Q   L+P  +ALENV +P L+   A  E +E
Sbjct: 66  EVVFQGKALNQLSAAAKAALRNRELGFIYQFHHLLPDFTALENVAMPLLIGNMAPKEAKE 125

Query: 123 RAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKV 182
           +AQ +L AVGL  R  H  ++LSGGE+QRVAIARA + SP ++ ADEPTGNLDQ T   +
Sbjct: 126 KAQTMLAAVGLAQRSQHRSSELSGGERQRVAIARALVNSPSLVLADEPTGNLDQRTTDAI 185

Query: 183 IDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGELEERV 225
            +LL ELN   GT  ++VTHD  LA R  R+  M+ G+L++ +
Sbjct: 186 FELLGELNVRQGTAFLVVTHDLHLASRLGRQLEMRDGQLQQEL 228